BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014C02SP1|AL426654
(779 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1093 1515 0.0
>3x_Contig1093
Length = 5169
Score = 1515 bits (764), Expect = 0.0
Identities = 778/780 (99%), Gaps = 2/780 (0%)
Strand = Plus / Minus
Query: 1 acacactgagaattagacacacacttggtctgaatacaactaaactcagtaatgcgacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1768 acacactgagaattagacacacacttggtctgaatacaactaaactcagta-tgcgacca 1710
Query: 61 caaagcttaaagaagcgttagtaaacggttgccgggagataaacgtaactgtaaaaaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1709 caaagcttaaagaagcgttagtaaacggttgccgggagataaacgtaactgtaaaaaccg 1650
Query: 121 tcaacgatattggttcccatatatatatatgcatctctgttttaatgtcatctcgacggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1649 tcaacgatattggttcccatatatatatatgcatctctgttttaatgtcatctcgacggt 1590
Query: 181 taatgaaaatttctggaaaatttagatggtgaaatctgtgggaaaaatgggcttataaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1589 taatgaaaatttctggaaaatttagatggtgaaatctgtgggaaaaatgggcttataaag 1530
Query: 241 gtcacgtggacagaaaatggagagcccaattaccatttaggatggcacttgtttcccttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1529 gtcacgtggacagaaaatggagagcccaattaccatttaggatggcacttgtttcccttg 1470
Query: 301 tttcccttgtttctttatgatcggtgcggtggttgccaatagcttgacgggagccttttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1469 tttcccttgtttctttatgatcggtgcggtggttgccaatagcttgacgggagccttttt 1410
Query: 361 gaactgtgcagaatgcagccatggtatggataatggttccactttggtagagatcatctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1409 gaactgtgcagaatgcagccatggtatggataatggttccactttggtagagatcatctt 1350
Query: 421 tgcaaaatcctgataatgagcatgtgtgcgcacaagacacataccgtcatgcactacatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1349 tgcaaaatcctgataatgagcatgtgtgcgcacaagacacataccgtcatgcactacatc 1290
Query: 481 cctgaacgcgtcatcgaacttggccgacgagagt-gaggtaattggacaagcgtcactgt 539
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1289 cctgaacgcgtcatcgaacttggccgacgagagtcgaggtaattggacaagcgtcactgt 1230
Query: 540 atggtccgaggtttcacataagataggtaactgcgaaattaaaactgacggcaaatcttt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1229 atggtccgaggtttcacataagataggtaactgcgaaattaaaactgacggcaaatcttt 1170
Query: 600 attgcatacgaacagcatatattcatctttcccatggcttaaaagatcgacgatttcgtt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1169 attgcatacgaacagcatatattcatctttcccatggcttaaaagatcgacgatttcgtt 1110
Query: 660 gaaaccaactgttatagattcttcattgttacccatatcctgtaaaagcttccatctctt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1109 gaaaccaactgttatagattcttcattgttacccatatcctgtaaaagcttccatctctt 1050
Query: 720 caatactttctcctctaataactccaggactaatttctgatccgtgacatgaggccatag 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 caatactttctcctctaataactccaggactaatttctgatccgtgacatgaggccatag 990
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7498
Number of Sequences: 1807
Number of extensions: 7498
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 779
length of database: 10,358,551
effective HSP length: 16
effective length of query: 763
effective length of database: 10,329,639
effective search space: 7881514557
effective search space used: 7881514557
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)